Publications

  1. Zhang, P.; Niu, C.; Winter, J. M. (2024) Under Review
  2. Gao, H.; Liu, H.-W.; Zhou, L.; Wang, P.; Peng, J.; Li, D.; Winter, J. M.; Wu, G. (2024) Under Review
  3. Cui, G.; Zhou, L.; Liu, H.; Qian, X.; Yang, P.; Cui, L.; Wang, P.; Li, D.; Winter, J. M.;+ Wu, G.+ (2024) Under Review
  4. Caro-Diaz, E. J.;+ Balunas, M. J.;+ Giddings, L.-A.; Loesgen, S.; Murphy, B. T.; Naman, C. B.; Salomon, C. E.; Tidgewell, K. J.; Winter, J. M. (2024) Outlining the Hidden Curriculum: Perspectives on Successfully Navigating Scientific Conferences. J Nat Prod. Accepted.
  5. Heard, S. C.+ & Winter, J. M.+ (2024) Structural, Biochemical and Bioinformatic Analyses of Nonribosomal Peptide Synthetase Adenylation Domains. Nat Prod Rep. Link
  6. Bring Horvath, E. R.; Stein, M. G.; Mulvey, M. A.; Hernandez, E. J.;+ Winter, J. M.+ (2024) Resistance Gene Association and Inference Network (ReGAIN): A Bioinformatics Pipeline for Assessing Probabilistic Co-Occurrence Between Resistance Genes in Bacterial Pathogens. bioRxiv, 2024.02.26.582197. Link
  7. Bring Horvath, E. R.; Brazelton, W. J.; Kim, M. C.; Cullum, R.; Mulvey, M. A.; Fenical, W.; Winter, J. M. (2024) Bacterial Diversity and Chemical Ecology of Natural Product-Producing Bacteria from Great Salt Lake Sediment. ISME Commun, 4, ycae029. Link
  8. Li, F.; Lai, S.; Yuan, W.; Chen, Z.; Guan, Z.; Chen, C.; Zhu, H.; Zhou, Y.; Winter, J. M.; Xiang, Z.; Liu, J. (2024) Conformational Control in Diterpene Synthase TlnA: Elucidating the Mechanism of 5-8-6 Skeleton Formation through Ring Expansion. Org Lett, 26, 1734-1738. Link
  9. Heard, S. C. & Winter, J. M. (2023) Structure-Guided Investigation of Fungal Adenylation Domain Substrate Selectivity. ChemRxiv. Link
  10. Heard, S.; Diehl, K. L.; Winter, J. M. (2023) Biosynthesis of the Fungal Nonribosomal Peptide Penilumamide A and Biochemical Characterization of a Pterin-Specific Adenylation Domain. RSC Chem Biol, 4, 748-753. Link
    • Contributor to the RSC Chemical Biology Emerging Investigators Collection Link
  11. Kim, M-C.; Winter, J. M.;+ Cullum, R.; Smith, A.; Fenical, W.+  (2023) Expanding the Utility of Bioinformatic Data for the Full Stereostructural Assignments of Marinolides A and B, 24- and 26-Membered Macrolactones Produced by a Chemically Exceptional Marine-Derived Bacterium. Marine Drugs, 21, 367. Link
  12. Terlouw, B. R.;* Blin, K.;* Navarro-Munoz, J. C.; Avalon, N.; Chevrette, M. G.; Egbert, S.; Lee, S.; Meijer, D.; Recchia, M. J. J.; Reitz, Z. L.; van Santen, J. A.; Selem-Mojica, N.; Torring, T.; Zaroubi, L.; Alanjary, M.; Aleti, G.; Aquilar, C.; Al-Salihi, S. A. A.; Augustijn, H. E.; Avelar-Rivas, J. A.; Avitia-Dominguez, L. A.; Barona-Gomez, F.; Bernaldo-Aguero, J.; Bielinski, V. A.; Biermann, F.; Booth, T. J.; Carrion Bravo, V. J.; Castelo-Branco, R.; Chagas, F. O.; Cruz-Morales, P.; Du, C.; Duncan, K. R.; Gavriilidou, A.; Gayrard, D.; Gutierrez-Garcia, K.; Haslinger, K.; Helfrich, E. J. N.; van der Hooft, J. J. J.; Jati, A. P.; Kalkreuter, E.; Kalyvas, N.; Bin Kang, K.; Kautsar, S.; Kim, W.; Kunjapur, A.; Li, Y.-X.; Lin, G.-M.; Loureiro, C.; Louwen, J. J. R.; Louwen, N. L. L.; Lund, G.; Parra, J.; Philmus, B.; Pourmohsenin, B.; Pronk, L. J. U.; Rego, A.; Arokia Balaya Rex, D.; Robinson, S.; Rosas-Becerra, L. R.; Roxborough, E. T.; Schorn, M. A.; Scobie, D. J.; Saurabh Singh, K.; Sokolova, N.; Tang, X.; Udwary, D.; Vigneshwari, A.; Vind, K.; Vromans, S. P. J. M.; Waschulin, V.; Williams, S. E.; Winter, J. M.; Witte, T. E.; Xie, H.; Yang, D.; Yu, J.; Zdouc, M.; Zhong, Z.; Collemare, J.; Linington, R. G.; Weber, T.; Medema M. H. (2023) MIBiG 3.0: A Community-Driven Effort to Annotate Experimentally Validated Biosynthetic Gene Clusters. Nuc Acids Res, 51, D603-D610. Link
  13. Bradshaw, A. J.; Dentinger, B.; Backman, T.; Ramírez-Cruz, V.; Forrister, D.; Winter, J. M.; Furci, G.; Stamets, P.; Guzmán-Dávalos, L. (2022) DNA Authentication and Chemical Analysis of Psilocybe Mushrooms Reveal Widespread Taxonomic Misdeterminations and Inconsistencies in Metabolites. Appl Environ Microbiol, 88, e0149822. Link
    • Spotlight article and cover of the issue
  14. Zhang, P.;* Wu, G.;* Heard, S. C.; Niu, C.; Bell, S. A.; Li, F.; Ye, L.; Zhang, Y.; Winter, J. M. (2022) Identification and Characterization of a Cryptic Bifunctional Type I Diterpene Synthase Involved in Talaronoid Biosynthesis from a Marine-Derived Fungus. Org Lett, 24, 7037-7041. Link
  15. Chen, P. Y-T.; Adak, S.; Chekan, J. R.; Liscombe, D. K.; Miyanaga, A.; Bernhardt, P.; Diethelm, S.; Fielding, E. N.; George, J. H.; Miles, Z. D.; Murray, L. A. M.; Steele, S. S.; Winter, J. M.; Noel, J. P.; Moore, B. S. (2022) Structural Basis of Stereospecific Vanadium-Dependent Haloperoxidase Family Enzymes in Napyradiomycin Biosynthesis. Biochem, 61, 1844-1852. Link
  16. Winter, J. M. (2021) A Community Effort: Combining Functional Amplicon Sequencing and Metagenomics Reveals Potential Biosynthetic Gene Clusters Associated with Protective Phenotypes in Rhizosphere Microbiomes. mSystems, 6, e0058721.  Link
  17. Shin, Y-H.; Ban, Y. H.; Shin, J.; Park, I. W.; Yoon, S.; Ko, K.; Shin, J.; Nam, S-J.; Winter, J. M.; Kim, Y.; Yoon, Y. J.; Oh, D-C. (2021) Azetidine-Bearing Non-Ribosomal Peptides, Bonnevillamides D and E, Isolated from a Carrion Beetle-Associated Actinomycete. J Org Chem, 86, 11149-11159.  Link
  18. Kim, M-C.; Winter, J. M.;+ Asolkar, R. N.; Boonlarppradab, C.; Cullum, R.; Fenical, W.+ (2021) Marinoterpins A-C: Rare Linear Merosesterterpenoids from Marine-Derived Actinomycete Bacteria of the Family Streptomycetaceae. J Org Chem, 86, 11140-11148.  Link
  19. Wu, G.; Dentinger, B. T. M.; Nielson, J. R.; Peterson, R. T.; Winter, J. M. (2021). Emerimicins V-X, 15 Residue Peptaibols Discovered from an Acremonium sp. through Integrated Genomic and Chemical Approaches. J Nat Prod, 84, 1113-1126.  Link
  20. Heard, S. C.; Wu, G.;+ Winter, J. M.+ (2021). Antifungal Natural Products. Curr Opin Biotechnol, 69, 232-241.  Link
  21. Heard, S. C.; Wu, G.; Winter, J. M. (2020). Discovery and Characterization of a Cytochalasan Biosynthetic Cluster from the Marine-Derived Fungus Aspergillus flavipes CNL-338. J Antibiot (Tokyo), 73(11), 803-807.  Link
  22. Kim, M-C.;* Winter, J. M.;* Machado, H. Cullum, R.; Zhifei, L.; Fenical, W. (2020). Complementary Genomic, Bioinformatics and Chemical Approaches Facilitate the Absolute Structure Assignment of Ionostatin, a Linear Polyketide from a Rare Marine-Derived Actinomycete. ACS Chem Biol, 15(9), 2507.  Link
  23. Torres, J. P.; Lin, Z.; Winter, J. M.; Krug, P. J.; Schmidt, E. W. (2020). Animal Biosynthesis of Complex Polyketides in a Photosynthetic Partnership. Nat Commun, 11(1), 2882.  Link
  24. Shang, Z.; Winter, J. M.;+ Kauffman, C. A.; Yang, I.; Fenical, W.+ (2019) Salinipeptins: Integrated Genomic and Chemical Approaches Reveal D-Amino Acid-Containing Ribosomally Synthesized and Post-Translationally Modified Peptides from a Great Salt Lake Streptomyces sp. ACS Chem Biol, 14(3), 415-425.  Link
    Highlighted in Chemistry World  Link
  25. Awan, A.R.; Winter, J. M.; Turner, D.; Shaw, W. M.; Suz, L. M.; Bradshaw, A. J.; Ellis, T.; Dentinger, B. T. M. (2018). Convergent Evolution of Psilocybin Biosynthesis by Psychedelic Mushrooms. bioRxiv, 374199  Link
  26. Wu, G.; Nielson, J. R.; Peterson, R. T.; Winter, J. M. (2017). Bonnevillamides, Linear Heptapeptides Isolated from a Great Salt Lake-Derived Streptomyces sp. Mar Drugs, 15(7), 195.  Link
  27. Agarwal, V.; Miles, Z. D.; Winter, J. M.; Eustaquio, A.S.; El Gamal, A. A.; Moore, B.S. (2017). Enzymatic Halogenation and Dehalogenation: Pervasive and Mechanistically Diverse. Chem Rev, 117, (8), 5619-5674.  Link
  28. Sato, M.; Dander, J. E.; Sato, C.; Hung, Y.; Gao, S-S.; Tang, M-C.; Hang, L.; Winter, J. M.; Garg, N. K.; Watanabe, K.; Tang, Y. (2017). Collaborative Biosynthesis of Maleimide- and Succinimide-Containing Natural Products by Fungal Polyketide Megasynthases. J Am Chem Soc, 139, 5317-5320.  Link
  29. Sato, M.; Winter, J. M.; Noguchi, H.; Tang, Y.; Watanabe, K. (2016). Combinatorial Generation of Chemical Diversity by Redox Enzymes in Chaetoviridin Biosynthesis. Org Lett, 18(6), 1446-1449.  Link
  30. Cochrane, R. V. K.; Gao, Z.; Lambkin, G. R.; Xu, W.; Winter, J. M.; Marcus, S. L.; Tang, Y.;  Vederas, J. C. (2015). Comparison of 10,11-Dehydrocurvularin Polyketide Synthases from Alternaria cinerariae and Aspergillus terreus Highlights Key Structural Motifs. Chembiochem, 16 (17), 2479-2483.  Link
  31. Winter, J. M.; Cascio, D.; Dietrich, D.; Sato, M.; Watanabe, K.; Sawaya, M. R.; Vederas, J. C.; Tang, Y. (2015). Biochemical and Structural Basis for Controlling Chemical Modularity in Fungal Polyketide Biosynthesis. J Am Chem Soc, 137(31), 9885-9893.  Link
  32. Winter, J. M. & Tang, Y. (2014). Natural Products: Getting a Handle on Peptides. Nat Chem, 6(12), 1037-1038.  Link
  33. Winter, J. M.; Chiou, G.; Bothwell, I.; Xu, W.; Garg, N. K.; Luo, M. K.; Tang, Y. (2013). Expanding the Structural Diversity of Polyketides by Exploring the Cofactor Tolerance of an Inline Methyltransferase Domain. Org Lett, 15(14), 3774-3777.   Link
  34. Winter, J. M.; Sato, M.; Sugimoto, S.; Chiou, G.; Garg, N. K.; Tang, Y.; Watanabe, K. (2012). Identification and Characterization of the Chaetoviridin and Chaetomugilin Gene Cluster in Chaetomium globosum Reveals Dual Functions of an Iterative Highly-Reducing Polyketide Synthase. J Am Chem Soc, 134(43), 17900-17903.  Link
  35. Winter, J. M., & Tang, Y. (2012). Synthetic Biological Approaches to Natural Product Biosynthesis. Curr Opin Biotechnol, 23, (5), 736-743.  Link
  36. Winter, J. M.; Behnken, S.; Hertweck, C. (2011). Genomics-Inspired Discovery of Natural Products. Curr Opin Chem Biol, 15, (1), 22-31.  Link
  37. Udwary, D. W.; Gontang, E. A.; Jones, A. C.; Schultz, A. W.; Sorrels, C. M.; Winter, J. M.; Yang, J. Y.; Beauchemin, N.; Capson, T. L.; Clark, B. R.; Esquenazi, E.; Eustaquio, A. S.; Freel, K.; Gonzalez, D. J;, Gerwick, L.; Gerwick, W. H.; Liu, W.; Malloy, K. L.; Maloney, K. N.; Nett, M.; Nunnery, J. K.; Penn, K.; Prieto-Davo, A.; Simmons, T. L.; Weitz, S.; Wilson, M. C.; Tisa, L. S.; Dorrestein P. C.; Moore, B. S. (2011). Significant Natural Product Biosynthetic Potential of Actinorhizal Symbionts of the Genus Frankia, as Revealed by Comparative Genomic and Proteomic Analyses. Appl Environ Microbiol, 77(11), 3617-3625.  Link
  38. Bernhardt, P.; Okino, T.; Winter, J. M.; Miyanaga, A.; Moore, B. S. (2011). A Stereoselective Vanadium-Dependent Chloroperoxidase in Bacterial Antibiotic Biosynthesis. J Am Chem Soc, 133 (12), 4268-4270.  Link
  39. Winter, J. M., & Moore, B. S. (2009). Exploring the Chemistry and Biology of Vanadium-Dependent Haloperoxidases. J Biol Chem, 284, (28), 18577-18581.  Link
  40. Winter, J. M.; Jansma, A. L.; Handel, T. M.;  Moore, B. S. (2009). Formation of the Pyridazine Natural Product Azamerone by Biosynthetic Rearrangement of an Aryl Diazoketone. Angew Chem Int Ed Engl, 48(4), 767-770.  Link
  41. Winter, J. M.; Moffitt, M. C.; Zazopoulos, E.; McAlpine, J. B.; Dorrestein, P. C.; Moore, B. S. (2007). Molecular Basis for Chloronium-Mediated Meroterpene Cyclization: Cloning, Sequencing, and Heterologous Expression of the Napyradiomycin Biosynthetic Gene Cluster. J Biol Chem, 282 (22), 16362-16368.  Link
  42. Cifuentes, M.; Schilling, B.; Ravindra, R.; Winter, J. M.; Janik, M. E. (2006). Synthesis and Biological Evaluation of B-ring Modified Colchicine and Isocolchicine Analogs. Bioorg Med Chem Lett, 16(10), 2761-2764.  Link

Editorials

  1. Naman, C. B.; Winter, J. M.; VanderMolen, K. (2020). #ASPYM2020- Younger Member Events and Research Symposium Go Virtual. American Society of Pharmacognosy Newsletter (56, pp. 21-23).
  2. Winter, J. M. (2007). Mentoring in ASP: A Mentee’s Perspective. American Society of Pharmacognosy Newsletter (43, pp. 10-11).